I use the blue paper towels one can find at Menards for cup wiping. If I am doing repeat specific colors I just wipe out the cup as needed. If I am changing colors, I wash them. I've mentioned before that I use a ton of 6 ounce custard cups made of Pyrex, perfect for 4 ounce batches. I guess I have about thirty of them right now. I also keep handy a half dozen 2 cup Pyrex measuring cups for larger batches, but never work with over 8 ounces of plastic at a time. About once every two weeks I do a mass washing. I haul all of the cups up to the kitchen and scrub them up nice and rinse three times in very hot clear water, then they are laid out upside down on a kitchen towel. I use a separate towel to give them a final wipe when I round them up for the trip downstairs to my work area. The very next stop is the microwave where they are placed on the tray in a single layer and nuked for a minute. Every one gets this treatment. No bubbles for this boy.
Another suggestion. Use the Essential. I have never seen such bubble-free plastic ever.